usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 26.4371904761905 2.19528571428571 4.76
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 952
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 352
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 352
Number of spheres polar: 110, nonpolar: 185, out of current total: 352
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.13574 36.33796 -6.22668 12.17414 -4.10212 14.70715
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 163
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 138
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 125
Spheres center of coords (x y z): 25.76384072 3.86461576 5.9378324
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.40035292949823
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 21