usefragsph not on
There are 14 ligand heavy atoms
Ligand center of coords (x y z): 52.3668571428571 153.962785714286 25.9089285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1109
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 452
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 452
Number of spheres polar: 166, nonpolar: 252, out of current total: 452
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 42.75331 62.32842 146.97559 163.96190 19.48508 35.58691
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 178
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 158
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 147
Spheres center of coords (x y z): 52.2586945578231 157.604049523809 29.2402998639456
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.83671899244133
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 14