There are 13 ligand heavy atoms Ligand center of coords (x y z): 52.4719230769231 153.97946 25.9644615384615 useligsph not on Starting number of spheres from sph/sph cluster 0: 1134 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 648 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 648 Number of spheres polar: 287, nonpolar: 322, out of current total: 648 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 40.54689 64.45841 147.03526 165.79477 15.05198 37.94381 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 173 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 125 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 52.4719230769231 153.97946 25.9644615384615 Center point: 79 xyz: 52.25183 154.49281 25.91283 After continuity checking, number of spheres is: 99 Final number of output spheres is: 99 Number of polar spheres: 45 Number of nonpolar spheres: 47 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 0