usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 52.4719230769231 153.97946 25.9644615384615
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1134
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 477
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 477
Number of spheres polar: 155, nonpolar: 294, out of current total: 477
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 42.47856 58.96130 147.03526 163.33099 18.65596 35.94720
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 130
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 95
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 88
Spheres center of coords (x y z): 52.6712417045455 155.910262727273 28.7322375
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.38588360392436
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 13