usefragsph not on
There are 7 ligand heavy atoms
Ligand center of coords (x y z): 54.038 152.925857142857 24.6444285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 859
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 344
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 344
Number of spheres polar: 156, nonpolar: 164, out of current total: 344
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 44.29454 63.88219 147.48070 162.91893 15.20217 34.56142
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 142
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 126
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 67
Spheres center of coords (x y z): 53.7855198507462 154.017089253731 26.0255188059701
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.78390210129142
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 7