Distance from surface specified: 1.80 There are 14 ligand heavy atoms Ligand center of coords (x y z): 52.3668571428571 153.962785714286 25.9089285714286 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 7801 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 6034 WARNING: removing a crystallographic sphere that is distance 1.28607387035115 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 6024 Number of spheres polar: 3601, nonpolar: 1826, out of current total: 6024 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 38.36820 66.35140 140.37260 167.92640 11.99500 39.90580 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 523 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 208 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 144 Final number of output spheres is: 144 Number of polar spheres: 69 Number of nonpolar spheres: 70 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 13