There are 14 ligand heavy atoms Ligand center of coords (x y z): 52.3668571428571 153.962785714286 25.9089285714286 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 7801 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 5108 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 5103 Number of spheres polar: 2980, nonpolar: 1539, out of current total: 5103 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 40.36720 64.34620 142.01060 165.92640 15.10620 37.88780 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 413 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 153 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 115 Final number of output spheres is: 115 Number of polar spheres: 58 Number of nonpolar spheres: 51 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 14