There are 14 ligand heavy atoms Ligand center of coords (x y z): 52.3668571428571 153.962785714286 25.9089285714286 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 808 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 574 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 570 Number of spheres polar: 233, nonpolar: 283, out of current total: 570 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 40.38766 64.34045 145.35704 165.65196 15.40004 37.90640 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 153 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 111 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 52.3668571428571 153.962785714286 25.9089285714286 Center point: 29 xyz: 52.30000 154.43304 25.80000 After continuity checking, number of spheres is: 62 Final number of output spheres is: 62 Number of polar spheres: 26 Number of nonpolar spheres: 32 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 0