usefragsph not on
There are 15 ligand heavy atoms
Ligand center of coords (x y z): 31.0678 5.2004 8.22826666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1200
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 666
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 666
Number of spheres polar: 327, nonpolar: 241, out of current total: 666
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.08748 40.98915 -0.04200 15.16204 -1.51812 18.15314
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 346
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 295
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 264
Spheres center of coords (x y z): 31.5502025378788 9.60238299242425 8.19857568181818
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.47605343723183
Final number of output spheres is: 60
Number of polar spheres: 40
Number of nonpolar spheres: 14
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 15