usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 30.5322926829268 41.9867804878049 2.36473170731707
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2260
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 880
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 879
Number of spheres polar: 281, nonpolar: 412, out of current total: 879
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.59836 40.45970 31.99813 51.94446 -7.62284 12.05100
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 487
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 420
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 409
Spheres center of coords (x y z): 29.3008416870415 42.9622545476773 -0.135405696821516
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.32032595175258
Final number of output spheres is: 60
Number of polar spheres: 33
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 41