usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 30.6361025641026 42.7129230769231 2.49897435897436
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2019
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 973
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 972
Number of spheres polar: 381, nonpolar: 411, out of current total: 972
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.77086 40.19053 32.74136 52.70670 -7.48354 11.38678
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 322
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 258
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 248
Spheres center of coords (x y z): 29.3987241532258 43.38581375 0.11337875
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.71909455329753
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 39