usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 30.7657435897436 42.5823846153846 2.50279487179487
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1902
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 887
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 883
Number of spheres polar: 322, nonpolar: 392, out of current total: 883
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.76866 40.46134 32.58362 52.55161 -7.46842 11.22690
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 303
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 244
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 228
Spheres center of coords (x y z): 29.3309277192982 43.1396079824562 -0.239131315789474
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.57397794621628
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 39