There are 49 ligand heavy atoms Ligand center of coords (x y z): -3.27026530612245 -3.38434693877551 30.9898775510204 useligsph not on Starting number of spheres from sph/sph cluster 0: 2359 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1236 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1227 Number of spheres polar: 405, nonpolar: 500, out of current total: 1227 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.26895 8.71950 -15.21341 8.43875 18.99149 42.96580 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 481 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 373 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.27026530612245 -3.38434693877551 30.9898775510204 Center point: 254 xyz: -3.19812 -3.87200 30.76588 After continuity checking, number of spheres is: 351 Spheres center of coords (x y z): -2.28861071225071 -3.61717481481481 26.81640002849 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 0.991908914728679 -0.530799557032112 37.3111896456257 Average weighted-distance for final elimination is: 32.1731252298925 Final number of output spheres is: 120 Number of polar spheres: 64 Number of nonpolar spheres: 50 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 0