usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 30.138512195122 1.50124390243902 34.4633170731707
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2034
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1031
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1031
Number of spheres polar: 429, nonpolar: 402, out of current total: 1031
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.31976 40.11603 -8.49494 11.33842 24.53200 44.43385
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 338
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 279
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 268
Spheres center of coords (x y z): 32.2963147014925 0.339380820895522 35.9380115298508
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.84725837903542
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 41