usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 25.9244 41.5757142857143 42.7214
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1823
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1022
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1022
Number of spheres polar: 296, nonpolar: 445, out of current total: 1022
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.93657 35.84429 31.58584 51.53200 32.74925 52.70984
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 591
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 517
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 509
Spheres center of coords (x y z): 26.2172142043222 42.497613870334 44.2710644007859
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.21270601147215
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 35