usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 13.0852571428571 -7.05885714285714 16.4103142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1820
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 786
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 786
Number of spheres polar: 246, nonpolar: 253, out of current total: 786
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.09012 23.01162 -16.68970 2.92083 9.69516 26.40487
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 477
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 420
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 405
Spheres center of coords (x y z): 13.8612345432099 -5.51452096296296 19.4219238271605
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.02870777063557
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 35