usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 6.39628571428571 2.85178571428571 21.6704285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1788
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 903
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 903
Number of spheres polar: 311, nonpolar: 314, out of current total: 903
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.58641 15.56799 -7.04280 12.71990 11.68114 31.60824
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 297
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 251
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 232
Spheres center of coords (x y z): 6.85068780172414 0.0578824999999994 19.1825123275862
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.02081788834138
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 28