usefragsph not on
There are 48 ligand heavy atoms
Ligand center of coords (x y z): 23.0865416666667 12.1846458333333 22.9942916666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1658
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 790
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 788
Number of spheres polar: 271, nonpolar: 318, out of current total: 788
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 13.14612 33.07398 2.24956 22.09944 12.99959 32.98178
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 458
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 403
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 393
Spheres center of coords (x y z): 22.9376711195929 14.3485466157761 23.5963096437659
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.59170372530235
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 48