usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 17.8972916666667 -40.2769166666667 9.048125
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1241
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 769
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 769
Number of spheres polar: 247, nonpolar: 266, out of current total: 769
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.95576 27.82438 -50.27077 -30.46750 -0.93149 18.89436
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 480
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 410
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 395
Spheres center of coords (x y z): 16.5601927848101 -42.1333689367089 10.8770027848101
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.53710640264524
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 32
Final number of spheres that are from crystallographic ligand: 24