There are 8 ligand heavy atoms Ligand center of coords (x y z): -2.789875 4.78075 10.3775 useligsph not on Starting number of spheres from sph/sph cluster 0: 523 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 507 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 507 Number of spheres polar: 121, nonpolar: 279, out of current total: 507 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.91553 9.17650 -5.50078 12.59725 1.63882 22.36940 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 171 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 144 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.789875 4.78075 10.3775 Center point: 43 xyz: -3.24077 5.09953 11.13753 After continuity checking, number of spheres is: 97 Final number of output spheres is: 97 Number of polar spheres: 25 Number of nonpolar spheres: 43 Number of spheres that are near neither polar nor nonpolar receptor atoms: 29 Final number of spheres that are from crystallographic ligand: 0