usefragsph not on
There are 4 ligand heavy atoms
Ligand center of coords (x y z): -5.78125 0.3205 16.9415
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 498
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 326
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 323
Number of spheres polar: 101, nonpolar: 169, out of current total: 323
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.19392 4.03449 -9.20392 10.29879 6.94376 25.31312
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 110
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 87
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 66
Spheres center of coords (x y z): -4.18959939393939 6.06249757575758 12.442731969697
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 9.16603825629882
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 4