There are 21 ligand heavy atoms Ligand center of coords (x y z): -3.857 5.19557142857143 14.8308095238095 useligsph not on Starting number of spheres from sph/sph cluster 0: 697 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 508 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 504 Number of spheres polar: 65, nonpolar: 308, out of current total: 504 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.03171 7.41847 -6.55100 16.99271 4.48264 26.74417 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 176 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 143 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.857 5.19557142857143 14.8308095238095 Center point: 89 xyz: -4.98999 5.97534 15.22000 After continuity checking, number of spheres is: 107 Final number of output spheres is: 107 Number of polar spheres: 15 Number of nonpolar spheres: 55 Number of spheres that are near neither polar nor nonpolar receptor atoms: 37 Final number of spheres that are from crystallographic ligand: 0