There are 25 ligand heavy atoms Ligand center of coords (x y z): -4.01644 4.84448 14.41528 useligsph not on Starting number of spheres from sph/sph cluster 0: 832 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 582 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 568 Number of spheres polar: 79, nonpolar: 325, out of current total: 568 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.19922 7.65268 -6.89991 16.78439 2.68438 25.94196 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 223 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 187 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -4.01644 4.84448 14.41528 Center point: 149 xyz: -5.00138 5.52648 14.55914 After continuity checking, number of spheres is: 154 Spheres center of coords (x y z): -1.80901961038961 4.38672590909091 10.4103092857143 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.7802663702506 -1.67717502021019 15.9636758286176 Average weighted-distance for final elimination is: 27.7080030096633 Final number of output spheres is: 120 Number of polar spheres: 20 Number of nonpolar spheres: 60 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0