usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): -4.54941176470588 3.75235294117647 14.8411764705882
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 620
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 480
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 473
Number of spheres polar: 130, nonpolar: 234, out of current total: 473
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.46746 5.36803 -5.84446 13.55097 5.42879 23.91998
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 249
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 221
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 185
Spheres center of coords (x y z): -4.57256427027027 5.76364832432432 12.3156921081081
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.42802902009093
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 17