There are 4 ligand heavy atoms Ligand center of coords (x y z): -6.58725 1.5845 13.4045 useligsph not on Starting number of spheres from sph/sph cluster 0: 485 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 407 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 398 Number of spheres polar: 105, nonpolar: 207, out of current total: 398 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.38197 5.34308 -9.04666 12.53246 1.72092 24.74133 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 163 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 140 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -6.58725 1.5845 13.4045 Center point: 64 xyz: -6.97786 2.13197 12.94493 After continuity checking, number of spheres is: 121 Spheres center of coords (x y z): -3.93873826446281 5.35945198347108 11.969773553719 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.60151574150785 -1.62589602319801 15.6131917978459 Average weighted-distance for final elimination is: 22.8222433661827 Final number of output spheres is: 120 Number of polar spheres: 30 Number of nonpolar spheres: 56 Number of spheres that are near neither polar nor nonpolar receptor atoms: 34 Final number of spheres that are from crystallographic ligand: 0