usefragsph not on
There are 4 ligand heavy atoms
Ligand center of coords (x y z): -6.58725 1.5845 13.4045
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 485
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 338
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 334
Number of spheres polar: 78, nonpolar: 184, out of current total: 334
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.38197 3.35565 -5.93980 11.57626 4.48123 22.87839
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 199
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 177
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 173
Spheres center of coords (x y z): -4.06451393063584 4.89467988439306 12.4473503468208
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.48614297140565
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 4