There are 26 ligand heavy atoms Ligand center of coords (x y z): -2.58434615384615 7.16 15.01 useligsph not on Starting number of spheres from sph/sph cluster 0: 779 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 535 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 532 Number of spheres polar: 130, nonpolar: 268, out of current total: 532 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.99564 9.08634 -4.35220 19.12333 4.18117 27.00681 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 210 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 176 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.58434615384615 7.16 15.01 Center point: 104 xyz: -3.31370 7.04576 14.83500 After continuity checking, number of spheres is: 120 Final number of output spheres is: 120 Number of polar spheres: 26 Number of nonpolar spheres: 53 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0