There are 5 ligand heavy atoms Ligand center of coords (x y z): -5.0052 0.7618 16.5058 useligsph not on Starting number of spheres from sph/sph cluster 0: 525 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 377 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 373 Number of spheres polar: 94, nonpolar: 198, out of current total: 373 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -16.34235 6.16680 -11.21722 12.12613 4.95162 28.17777 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 147 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 125 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.0052 0.7618 16.5058 Center point: 95 xyz: -4.54324 1.44700 16.21805 After continuity checking, number of spheres is: 90 Final number of output spheres is: 90 Number of polar spheres: 16 Number of nonpolar spheres: 46 Number of spheres that are near neither polar nor nonpolar receptor atoms: 28 Final number of spheres that are from crystallographic ligand: 0