There are 25 ligand heavy atoms Ligand center of coords (x y z): -2.90744 5.74836 14.26652 useligsph not on Starting number of spheres from sph/sph cluster 0: 682 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 478 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 456 Number of spheres polar: 89, nonpolar: 243, out of current total: 456 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.52738 9.02681 -5.64127 15.83098 3.54010 25.78379 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 182 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 149 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.90744 5.74836 14.26652 Center point: 115 xyz: -3.30007 4.57613 14.13089 After continuity checking, number of spheres is: 121 Spheres center of coords (x y z): -3.24332256198347 5.5041452892562 11.8306399173554 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.65157292506041 -1.65004794520548 15.8599278807413 Average weighted-distance for final elimination is: 23.7387559217317 Final number of output spheres is: 120 Number of polar spheres: 29 Number of nonpolar spheres: 45 Number of spheres that are near neither polar nor nonpolar receptor atoms: 46 Final number of spheres that are from crystallographic ligand: 0