There are 20 ligand heavy atoms Ligand center of coords (x y z): -3.7145 5.10275 14.89855 useligsph not on Starting number of spheres from sph/sph cluster 0: 818 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 579 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 564 Number of spheres polar: 122, nonpolar: 287, out of current total: 564 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.01286 8.13345 -6.74346 15.98096 4.03491 26.40589 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 212 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 171 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.7145 5.10275 14.89855 Center point: 128 xyz: -2.94671 4.25666 14.48342 After continuity checking, number of spheres is: 132 Spheres center of coords (x y z): -3.09738007575758 5.21607878787879 11.5532218939394 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.64402256244963 -1.59384568896051 15.8493319903304 Average weighted-distance for final elimination is: 24.5017104087385 Final number of output spheres is: 120 Number of polar spheres: 26 Number of nonpolar spheres: 52 Number of spheres that are near neither polar nor nonpolar receptor atoms: 42 Final number of spheres that are from crystallographic ligand: 0