usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -3.7145 5.10275 14.89855
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 818
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 541
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 533
Number of spheres polar: 120, nonpolar: 282, out of current total: 533
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.11992 6.26649 -4.80694 15.08825 4.91000 24.87239
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 296
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 273
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 235
Spheres center of coords (x y z): -3.48837123404255 4.96845242553191 11.9081553191489
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.54008022472643
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 20