usefragsph not on
There are 22 ligand heavy atoms
Ligand center of coords (x y z): -3.72054545454545 5.63427272727273 14.324
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 750
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 480
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 476
Number of spheres polar: 103, nonpolar: 255, out of current total: 476
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.00887 6.19726 -4.31598 15.46293 4.36689 24.29333
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 281
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 253
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 221
Spheres center of coords (x y z): -3.97229384615385 5.42316737556561 11.9994699547511
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.60686383907397
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 22