There are 8 ligand heavy atoms Ligand center of coords (x y z): -5.784625 0.98425 15.852625 useligsph not on Starting number of spheres from sph/sph cluster 0: 524 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 356 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 354 Number of spheres polar: 84, nonpolar: 193, out of current total: 354 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.83605 6.15073 -10.94754 12.10741 4.41988 24.20815 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 138 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 105 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.784625 0.98425 15.852625 Center point: 77 xyz: -5.78700 1.27013 16.67504 After continuity checking, number of spheres is: 86 Final number of output spheres is: 86 Number of polar spheres: 14 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 31 Final number of spheres that are from crystallographic ligand: 0