usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): -4.34426666666667 5.30593333333333 13.4593
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 804
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 483
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 480
Number of spheres polar: 96, nonpolar: 270, out of current total: 480
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.40407 5.59689 -4.65340 14.83100 4.63799 23.14377
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 271
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 238
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 210
Spheres center of coords (x y z): -4.64933285714286 5.64556852380952 11.6450686190476
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.56123887489686
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 30