usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): -4.64086206896552 4.97596551724138 13.7469655172414
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 876
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 535
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 527
Number of spheres polar: 111, nonpolar: 262, out of current total: 527
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.68169 5.35038 -4.92079 14.84249 3.86994 23.58163
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 202
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 167
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 138
Spheres center of coords (x y z): -4.46154485507247 5.49237644927536 11.6436429710145
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.05841308989399
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 29