usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): -5.31141666666667 2.19925 15.8360833333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 695
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 457
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 454
Number of spheres polar: 111, nonpolar: 239, out of current total: 454
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.98902 4.12300 -7.69388 12.10321 5.97346 24.61467
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 251
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 219
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 196
Spheres center of coords (x y z): -4.14027357142857 4.42269591836734 12.6527473469388
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.42829209102592
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 12