There are 18 ligand heavy atoms Ligand center of coords (x y z): -5.05455555555556 4.295 14.1992777777778 useligsph not on Starting number of spheres from sph/sph cluster 0: 784 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 560 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 549 Number of spheres polar: 174, nonpolar: 265, out of current total: 549 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.19980 6.93041 -7.60269 16.22590 3.90576 26.18500 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 209 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 162 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.05455555555556 4.295 14.1992777777778 Center point: 128 xyz: -4.71678 4.18466 14.07110 After continuity checking, number of spheres is: 123 Spheres center of coords (x y z): -4.71969674796748 6.40083658536586 11.5951579674797 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.371452247191 -1.68341613162119 15.7343832263243 Average weighted-distance for final elimination is: 23.3285106357426 Final number of output spheres is: 120 Number of polar spheres: 39 Number of nonpolar spheres: 51 Number of spheres that are near neither polar nor nonpolar receptor atoms: 30 Final number of spheres that are from crystallographic ligand: 0