usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): -4.97004761904762 5.74995238095238 13.6914285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 642
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 417
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 409
Number of spheres polar: 86, nonpolar: 239, out of current total: 409
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.26341 4.92318 -3.93400 15.65572 4.42359 23.41913
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 162
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 136
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 125
Spheres center of coords (x y z): -4.5394248 6.33406568 11.50720416
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.47495558537637
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 21