There are 14 ligand heavy atoms Ligand center of coords (x y z): -4.30521428571429 2.89835714285714 14.4908571428571 useligsph not on Starting number of spheres from sph/sph cluster 0: 649 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 487 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 472 Number of spheres polar: 99, nonpolar: 265, out of current total: 472 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.96654 7.66713 -7.86189 13.20099 2.51610 25.10622 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 166 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 144 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -4.30521428571429 2.89835714285714 14.4908571428571 Center point: 63 xyz: -4.46475 2.65556 14.53473 After continuity checking, number of spheres is: 111 Final number of output spheres is: 111 Number of polar spheres: 26 Number of nonpolar spheres: 49 Number of spheres that are near neither polar nor nonpolar receptor atoms: 36 Final number of spheres that are from crystallographic ligand: 0