usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): -5.06630769230769 1.34484615384615 14.6850769230769
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 614
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 429
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 426
Number of spheres polar: 100, nonpolar: 229, out of current total: 426
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.87413 4.59790 -7.63245 11.30467 5.24162 24.66037
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 232
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 212
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 203
Spheres center of coords (x y z): -4.33675497536946 4.63466226600985 12.2222123152709
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.67210520154722
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 13