There are 20 ligand heavy atoms Ligand center of coords (x y z): -3.2823 5.45505 14.91475 useligsph not on Starting number of spheres from sph/sph cluster 0: 775 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 593 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 570 Number of spheres polar: 143, nonpolar: 292, out of current total: 570 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.16819 7.48989 -6.01003 17.40695 4.53609 26.34471 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 213 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 170 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.2823 5.45505 14.91475 Center point: 86 xyz: -3.89582 6.31228 14.93900 After continuity checking, number of spheres is: 133 Spheres center of coords (x y z): -1.77545293233083 5.06594225563909 11.6197012781955 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.43797481007596 -1.6011631347461 15.8906589364254 Average weighted-distance for final elimination is: 23.8719036001566 Final number of output spheres is: 120 Number of polar spheres: 27 Number of nonpolar spheres: 51 Number of spheres that are near neither polar nor nonpolar receptor atoms: 42 Final number of spheres that are from crystallographic ligand: 0