usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -3.2823 5.45505 14.91475
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 775
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 560
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 544
Number of spheres polar: 128, nonpolar: 286, out of current total: 544
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.16819 6.63423 -4.46186 15.05846 5.11832 24.85110
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 194
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 159
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 134
Spheres center of coords (x y z): -1.71174358208955 5.28675067164179 11.7778520149254
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.42283308142149
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 20