There are 5 ligand heavy atoms Ligand center of coords (x y z): -5.9874 0.6028 16.9622 useligsph not on Starting number of spheres from sph/sph cluster 0: 515 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 349 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 347 Number of spheres polar: 109, nonpolar: 148, out of current total: 347 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.40719 5.77331 -11.38251 12.53561 5.19287 23.44565 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 116 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 95 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.9874 0.6028 16.9622 Center point: 90 xyz: -6.82057 0.48243 17.39110 After continuity checking, number of spheres is: 68 Final number of output spheres is: 68 Number of polar spheres: 20 Number of nonpolar spheres: 22 Number of spheres that are near neither polar nor nonpolar receptor atoms: 26 Final number of spheres that are from crystallographic ligand: 0