There are 20 ligand heavy atoms Ligand center of coords (x y z): -3.7971 4.70655 13.95115 useligsph not on Starting number of spheres from sph/sph cluster 0: 627 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 432 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 422 Number of spheres polar: 96, nonpolar: 215, out of current total: 422 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.26984 7.23236 -5.92527 15.91374 3.34337 24.17881 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 155 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 129 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.7971 4.70655 13.95115 Center point: 85 xyz: -3.65616 4.64104 13.54420 After continuity checking, number of spheres is: 100 Final number of output spheres is: 100 Number of polar spheres: 24 Number of nonpolar spheres: 35 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0