There are 13 ligand heavy atoms Ligand center of coords (x y z): -4.15253846153846 5.87284615384615 10.5690769230769 useligsph not on Starting number of spheres from sph/sph cluster 0: 580 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 490 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 481 Number of spheres polar: 113, nonpolar: 235, out of current total: 481 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.93231 7.70226 -5.37226 17.56192 -1.08328 22.37480 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 177 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 152 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -4.15253846153846 5.87284615384615 10.5690769230769 Center point: 98 xyz: -3.92900 6.44115 11.24115 After continuity checking, number of spheres is: 105 Final number of output spheres is: 105 Number of polar spheres: 24 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 39 Final number of spheres that are from crystallographic ligand: 0