usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): -3.89270588235294 4.38441176470588 14.9345882352941
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 792
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 508
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 489
Number of spheres polar: 126, nonpolar: 263, out of current total: 489
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.33740 6.10721 -5.58461 14.17321 5.26546 24.80345
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 256
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 227
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 194
Spheres center of coords (x y z): -2.24670154639175 4.3127762371134 11.9636695876289
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.27816961750517
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 17