There are 12 ligand heavy atoms Ligand center of coords (x y z): 15.559 3.83366666666667 15.69625 useligsph not on Starting number of spheres from sph/sph cluster 0: 582 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 417 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 411 Number of spheres polar: 101, nonpolar: 222, out of current total: 411 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.79067 27.37825 -5.93517 14.83181 4.72797 23.81032 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 141 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 120 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 15.559 3.83366666666667 15.69625 Center point: 82 xyz: 15.51033 4.51926 15.59968 After continuity checking, number of spheres is: 102 Final number of output spheres is: 102 Number of polar spheres: 20 Number of nonpolar spheres: 49 Number of spheres that are near neither polar nor nonpolar receptor atoms: 33 Final number of spheres that are from crystallographic ligand: 0