There are 12 ligand heavy atoms Ligand center of coords (x y z): 15.33675 4.04591666666667 15.7725833333333 useligsph not on Starting number of spheres from sph/sph cluster 0: 568 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 392 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 385 Number of spheres polar: 103, nonpolar: 205, out of current total: 385 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.72591 27.23493 -7.31572 14.98493 5.09278 26.79070 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 138 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 110 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 15.33675 4.04591666666667 15.7725833333333 Center point: 82 xyz: 15.44090 4.62697 15.53874 After continuity checking, number of spheres is: 88 Final number of output spheres is: 88 Number of polar spheres: 18 Number of nonpolar spheres: 39 Number of spheres that are near neither polar nor nonpolar receptor atoms: 31 Final number of spheres that are from crystallographic ligand: 0