usefragsph not on
There are 4 ligand heavy atoms
Ligand center of coords (x y z): -6.17175 0.567 17.008
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 588
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 403
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 397
Number of spheres polar: 160, nonpolar: 177, out of current total: 397
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.98018 3.80291 -9.10813 10.53655 7.14262 26.91926
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 196
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 166
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 146
Spheres center of coords (x y z): -4.11681671232876 4.66188691780822 13.2440852054795
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.62561419541333
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 4