There are 30 ligand heavy atoms Ligand center of coords (x y z): -2.00246666666667 5.7865 13.8743666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 743 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 538 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 520 Number of spheres polar: 107, nonpolar: 305, out of current total: 520 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.34830 9.97913 -6.08266 17.51569 3.23685 25.69736 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 213 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 167 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.00246666666667 5.7865 13.8743666666667 Center point: 83 xyz: -2.37382 6.12981 13.66432 After continuity checking, number of spheres is: 97 Final number of output spheres is: 97 Number of polar spheres: 14 Number of nonpolar spheres: 49 Number of spheres that are near neither polar nor nonpolar receptor atoms: 34 Final number of spheres that are from crystallographic ligand: 0